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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6239091_6239177_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6239091 - 6239177

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTCAT

U12 Branch Point Sequence:

GCGGCCTCATCT

Flanking Amino Acid:

GGQEGPAGSPGLPGDKGEPG

Intron Amino Acid Position:

732

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.2

37.4

Major BPS

64.6

0.36

1.3

67.6

40.6

Major PPT

0.68

0.8

73.3

31.6

Minor 5ss

38.8

-1.3

2.9

46.2

Minor BPS

46.9

-0.1

1.9

60.59

48.6

Associated Gene:

Gene:

COL16A1

Ensembl Gene ID:

ENSAPLG00000024730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021875

6237728 - 6249461

11734