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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6239214_6239345_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6239214 - 6239345

Intron Length:

132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CGATGTCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

GGATCCTGACCC

Flanking Amino Acid:

PGLAGIKGEKGAGGQEGPAG

Intron Amino Acid Position:

720

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.9

33.8

Major BPS

68.9

0.47

59.2

39.1

Major PPT

73.8

0.54

69.4

41.5

Minor 5ss

26.1

-2.7

3.2

33.4

42.6

Minor BPS

52.7

0.06

1.8

62.26

42.3

Associated Gene:

Gene:

COL16A1

Ensembl Gene ID:

ENSAPLG00000024730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021875

6237728 - 6249461

11734