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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6240710_6240799_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6240710 - 6240799

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGGGGC

5'SS Class:

major

3'SS Sequence:

CTGTCCTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

GACAGCAGAGCT

Flanking Amino Acid:

SPGIGFPGKPGDPGGPPGPK

Intron Amino Acid Position:

574

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

64.8

41.3

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

75.1

0.57

72.9

37.4

Minor 5ss

30.1

-2.3

3.5

41.6

45.3

Minor BPS

36.4

-0.9

49.01

43.2

Associated Gene:

Gene:

COL16A1

Ensembl Gene ID:

ENSAPLG00000024730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021875

6237728 - 6249461

11734