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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6240896_6240966_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6240896 - 6240966

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGGG

5'SS Class:

major

3'SS Sequence:

CCTTGGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGAAAA

U12 Branch Point Sequence:

TGGCATGGAAAA

Flanking Amino Acid:

ICVVGPKGQKGDPGLVGPEG

Intron Amino Acid Position:

542

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

1.1

67.1

44.6

Major BPS

47.2

-0.1

1.3

41.5

Major PPT

75.6

0.58

0.9

72.6

37.6

Minor 5ss

37.6

-1.4

3.2

49.7

46.6

Minor BPS

37.2

-0.9

44.86

Associated Gene:

Gene:

COL16A1

Ensembl Gene ID:

ENSAPLG00000024730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021875

6237728 - 6249461

11734