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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6241166_6241313_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6241166 - 6241313

Intron Length:

148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGATG

5'SS Class:

strong_major

3'SS Sequence:

GTCTGTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGACAC

U12 Branch Point Sequence:

GCACCGGTGACA

Flanking Amino Acid:

PGAVGADGEKGQKGEKGDGG

Intron Amino Acid Position:

506

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

78.6

37.3

Major BPS

-0.2

1.3

52.4

43.3

Major PPT

71.2

0.48

0.9

61.8

Minor 5ss

30.4

-2.2

3.2

38.7

46.6

Minor BPS

40.2

-0.7

2.5

49.14

41.6

Associated Gene:

Gene:

COL16A1

Ensembl Gene ID:

ENSAPLG00000024730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021875

6237728 - 6249461

11734