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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6241649_6241767_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6241649 - 6241767

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

TCTCCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCACAT

U12 Branch Point Sequence:

CCCCCCTGAGCC

Flanking Amino Acid:

YGTKGEKGERGADCVRTDPG

Intron Amino Acid Position:

465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

62.4

37.7

Major BPS

48.9

-0

1.2

56.9

40.5

Major PPT

78.3

0.64

0.7

25.1

Minor 5ss

30.5

-2.2

3.1

36.8

40.4

Minor BPS

47.2

-0.2

1.8

52.44

44.7

Associated Gene:

Gene:

COL16A1

Ensembl Gene ID:

ENSAPLG00000024730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021875

6237728 - 6249461

11734