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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6242010_6242181_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6242010 - 6242181

Intron Length:

172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

GCTCTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCCAC

U12 Branch Point Sequence:

TCTGTGCCACCC

Flanking Amino Acid:

PCSPRTSPANVTLGPPGPKG

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.3

69.3

35.8

Major BPS

43.9

-0.3

1.4

49.9

45.3

Major PPT

74.1

0.54

0.8

65.3

36.2

Minor 5ss

29.9

-2.3

3.1

35.2

33.9

Minor BPS

33.9

-1.2

2.4

45.95

43.3

Associated Gene:

Gene:

COL16A1

Ensembl Gene ID:

ENSAPLG00000024730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021875

6237728 - 6249461

11734