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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6242537_6242961_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6242537 - 6242961

Intron Length:

425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

GGCTTCTCACCC

Flanking Amino Acid:

SSLKGDHGEKGYRGPPGTRS

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

0.87

0.8

85.6

Major PPT

78.1

0.63

0.7

72.3

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

47.6

-0.2

1.8

55.57

42.6

Associated Gene:

Gene:

COL16A1

Ensembl Gene ID:

ENSAPLG00000024730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021875

6237728 - 6249461

11734