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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6243016_6243258_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6243016 - 6243258

Intron Length:

243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGGCCG

5'SS Class:

major

3'SS Sequence:

GCTCTCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCGTCAC

U12 Branch Point Sequence:

GAGGCGTCACCC

Flanking Amino Acid:

CFCLEEPLGSEPARASERSS

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

54.3

44.3

Major BPS

47.8

-0.1

1.4

44.3

Major PPT

74.9

0.56

0.8

31.5

Minor 5ss

26.1

-2.7

3.1

31.8

42.1

Minor BPS

38.1

-0.9

2.3

44.16

43.6

Associated Gene:

Gene:

COL16A1

Ensembl Gene ID:

ENSAPLG00000024730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021875

6237728 - 6249461

11734