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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6243683_6243761_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6243683 - 6243761

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGAACC

5'SS Class:

major

3'SS Sequence:

CTTCCCGCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

CGGGTCTCATCG

Flanking Amino Acid:

LDATRGTPIRFDLQQAHIYC

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

68.6

36.5

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

75.9

0.58

0.8

69.3

31.3

Minor 5ss

28.9

-2.4

2.7

28.2

35.6

Minor BPS

41.4

-0.7

1.9

39.25

44.4

Associated Gene:

Gene:

COL16A1

Ensembl Gene ID:

ENSAPLG00000024730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021875

6237728 - 6249461

11734