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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6244038_6244135_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6244038 - 6244135

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCCC

5'SS Class:

major

3'SS Sequence:

CCTCTCTGCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCAAC

U12 Branch Point Sequence:

CACCCCCGAGCA

Flanking Amino Acid:

QVTDRQGYPQLSLAVHGPEK

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.44

1.1

55.4

40.1

Major BPS

46.8

-0.2

1.1

30.4

Major PPT

71.7

0.49

0.9

64.3

36.6

Minor 5ss

30.3

-2.3

3.5

42.7

44.4

Minor BPS

41.5

-0.6

1.9

41.6

Associated Gene:

Gene:

COL16A1

Ensembl Gene ID:

ENSAPLG00000024730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021875

6237728 - 6249461

11734