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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6244260_6245896_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6244260 - 6245896

Intron Length:

1637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TGCCCCCTGACG

Flanking Amino Acid:

LGAVPLVQPTRQVFPRGLPP

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.2

39.6

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

0.5

0.8

65.4

30.4

Minor 5ss

-2.5

33.4

41.6

Minor BPS

50.9

-0.1

1.8

58.16

43.2

Associated Gene:

Gene:

COL16A1

Ensembl Gene ID:

ENSAPLG00000024730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021875

6237728 - 6249461

11734