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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6246015_6246130_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6246015 - 6246130

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CACCTCTCACCG

Flanking Amino Acid:

LVGDKYENVTGFNLIKRFDL

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

74.9

Major BPS

72.7

0.56

30.1

Major PPT

75.5

0.57

0.8

68.9

31.6

Minor 5ss

31.1

-2.2

3.1

31.2

42.7

Minor BPS

42.8

-0.6

1.8

41.43

43.2

Associated Gene:

Gene:

COL16A1

Ensembl Gene ID:

ENSAPLG00000024730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021875

6237728 - 6249461

11734