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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6253782_6254103_R


Intron Information:

Intron Rank:
24

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
6253782 - 6254103

Intron Length:
322

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAGCCAC

5'SS Class:
strong_major

3'SS Sequence:
TCTCGCCCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AACTGAC

U12 Branch Point Sequence:
ACAAACTGACAC

Flanking Amino Acid:
RLRYSDLDFEKVMHTRKRHS

Intron Amino Acid Position:
1152

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.6
0.79
0.9
68.4
38.7

Major BPS
64.8
0.37
0.9
55.1
32.8

Major PPT
76.8
0.6
0.8
69.7
31.1

Minor 5ss
32.7
-2
3
41
45.6

Minor BPS
39.1
-0.8
1.8
42.01
37.4

Associated Gene:

Gene:
ADGRB2

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6252854 - 6266811
13958

6252854 - 6266811
13958