Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_6254140_6254430_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6254140 - 6254430

Intron Length:

291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CACCCCCTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTGCAC

U12 Branch Point Sequence:

GCCCCGTGCACC

Flanking Amino Acid:

GSAMKVGSLERKRLRYSDLD

Intron Amino Acid Position:

1140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

45.1

-0.3

1.4

52.4

43.3

Major PPT

0.27

53.7

36.2

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

38.8

-0.9

2.4

45.01

43.1

Associated Gene:

Gene:

ADGRB2

Ensembl Gene ID:

ENSAPLG00000029913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045118

6252854 - 6266811

13958

ENSAPLT00000039700

6252854 - 6266811

13958