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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6257890_6258160_R


Intron Information:

Intron Rank:
16

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
6257890 - 6258160

Intron Length:
271

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAAGGGGG

5'SS Class:
major

3'SS Sequence:
CTCCCTCCTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCTGCAG

U12 Branch Point Sequence:
CCCCCTGCAGCT

Flanking Amino Acid:
VRKRFLCLGWGLPALVVAVS

Intron Amino Acid Position:
750

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.3
0.64
1.1
58.7
46.2

Major BPS
40.6
-0.5
1.6
48.7
45.1

Major PPT
78
0.63
0.7
69.1
31.5

Minor 5ss
28.2
-2.5
3.4
29.1
43.5

Minor BPS
37.5
-0.8
2.1
48.65
44.9

Associated Gene:

Gene:
ADGRB2

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6252854 - 6266811
13958

6252854 - 6266811
13958

6252854 - 6266811
13958