Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_6258629_6258880_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6258629 - 6258880

Intron Length:

252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGACAACC

5'SS Class:

major

3'SS Sequence:

TGCCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCCCAT

U12 Branch Point Sequence:

ATGGCCCCATGC

Flanking Amino Acid:

TLLVIYAAFWRFIKSERSII

Intron Amino Acid Position:

665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

68.6

36.5

Major BPS

46.8

-0.2

1.4

54.3

42.9

Major PPT

67.9

0.4

0.8

58.1

33.2

Minor 5ss

34.8

-1.7

2.9

44.4

43.1

Minor BPS

36.8

-1

2.1

45.41

43.1

Associated Gene:

Gene:

ADGRB2

Ensembl Gene ID:

ENSAPLG00000029913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045118

6252854 - 6266811

13958

ENSAPLT00000039700

6252854 - 6266811

13958

ENSAPLT00000019126

6252854 - 6266811

13958