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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6260492_6260638_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
6260492 - 6260638

Intron Length:
147

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAC|GTGCGTGTC

5'SS Class:
major

3'SS Sequence:
CGTCTGTCCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTCAA

U12 Branch Point Sequence:
CGCTGCTCAACC

Flanking Amino Acid:
VLVELSHVINGTSHPQCVTW

Intron Amino Acid Position:
574

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.2
0.38
1.3
66.8
39.3

Major BPS
70.6
0.51
1.1
71.6
36.4

Major PPT
71.2
0.48
0.9
64.1
36.8

Minor 5ss
32.1
-2
3.5
41.9
38.7

Minor BPS
49.1
-0
2
59.01
45.8

Associated Gene:

Gene:
ADGRB2

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6252854 - 6266811
13958

6252854 - 6266811
13958

6252854 - 6266811
13958