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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6262124_6262550_R


Intron Information:

Intron Rank:
5

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
6262124 - 6262550

Intron Length:
427

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCA|GTAGGTGCA

5'SS Class:
major

3'SS Sequence:
CCCCCTATCCAAG|C

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
GTGACAC

U12 Branch Point Sequence:
CCCCCCCTATCC

Flanking Amino Acid:
SHEYRYLHLSLREHLAKGQR

Intron Amino Acid Position:
341

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.2
0.38
1.1
60
39.3

Major BPS
46
-0.2
1.3
52.4
43.3

Major PPT
58.1
0.18
1
55.4
32.6

Minor 5ss
33.8
-1.8
3.4
46.1
43.3

Minor BPS
45.5
-0.3
1.9
52.17
45.2

Associated Gene:

Gene:
ADGRB2

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6252854 - 6266811
13958

6252854 - 6266811
13958

6252854 - 6266811
13958