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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6264157_6266330_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
6264157 - 6266330

Intron Length:
2174

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCGGGG

5'SS Class:
major

3'SS Sequence:
GTTGTCCCCGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CACTGAT

U12 Branch Point Sequence:
GCACACTGATGC

Flanking Amino Acid:
RTCNNTATCPVEGQWLEWGA

Intron Amino Acid Position:
161

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
63.7
0.32
1.3
49.8
46.9

Major BPS
71.2
0.53
1
61
37.5

Major PPT
73.1
0.52
0.9
66.4
35.7

Minor 5ss
33.1
-1.9
3.7
46.9
48.5

Minor BPS
37.5
-0.9
1.9
39.61
38.6

Associated Gene:

Gene:
ADGRB2

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6252854 - 6266811
13958

6252854 - 6266811
13958

6252854 - 6266811
13958