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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6343784_6344915_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6343784 - 6344915

Intron Length:

1132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTTAA

5'SS Class:

major

3'SS Sequence:

CTGTTTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTCCATTGATA

Flanking Amino Acid:

KYEDAVQFIRQKRRGAFNSK

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

74.3

32.1

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

78.2

0.64

0.9

76.9

37.3

Minor 5ss

41.7

-0.9

2.8

54.7

43.6

Minor BPS

65.1

0.47

1.6

77.35

32.6

Associated Gene:

Gene:

PTP4A2

Ensembl Gene ID:

ENSAPLG00000030704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021653

6343675 - 6353385

9711