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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6347175_6351598_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6347175 - 6351598

Intron Length:

4424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTGAGTTGT

5'SS Class:

major

3'SS Sequence:

TTTTCCTTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCAGGAA

U12 Branch Point Sequence:

TTTTCCTTCAAA

Flanking Amino Acid:

PIEKEGIQVLDWPFDDGAPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

70.3

36.3

Major BPS

45.2

-0.3

1.4

39.7

40.4

Major PPT

76.9

0.6

78.5

27.6

Minor 5ss

38.3

-1.3

50.8

41.1

Minor BPS

71.3

0.66

1.8

84.76

Associated Gene:

Gene:

PTP4A2

Ensembl Gene ID:

ENSAPLG00000030704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021653

6343675 - 6353385

9711