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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6351692_6353280_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6351692 - 6353280

Intron Length:

1589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TTCTTCCTAAAG

Flanking Amino Acid:

TNATLCKFIEELKKYGVTTL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

78.1

0.63

79.2

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

55.4

0.03

1.9

64.91

42.8

Associated Gene:

Gene:

PTP4A2

Ensembl Gene ID:

ENSAPLG00000030704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021653

6343675 - 6353385

9711