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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6374834_6375407_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6374834 - 6375407

Intron Length:

574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTATTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TCTTTTTGTATT

Flanking Amino Acid:

VLIPVKQYPKFNFVGKILGP

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.9

33.4

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

0.81

0.8

77.7

40.6

Minor 5ss

-2.9

3.3

32.7

42.5

Minor BPS

50.1

0.09

1.7

71.39

40.7

Associated Gene:

Gene:

KHDRBS1

Ensembl Gene ID:

ENSAPLG00000006587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006859

6319321 - 6383649

64329

ENSAPLT00000037905

6368804 - 6383745

14942