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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6392123_6393444_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6392123 - 6393444

Intron Length:

1322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCGG

5'SS Class:

major

3'SS Sequence:

TTTGCCCTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CACGGAGTGACT

Flanking Amino Acid:

SSVTGVRSRTRSGSGTGLSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.1

48.7

47.2

Major BPS

66.3

0.4

1.1

41.8

Major PPT

0.43

62.8

39.6

Minor 5ss

28.4

-2.5

3.5

38.7

46.4

Minor BPS

35.4

-1

2.4

48.23

44.9

Associated Gene:

Gene:

TMEM39B

Ensembl Gene ID:

ENSAPLG00000006828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007098

6391913 - 6397790

5878