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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6396626_6397072_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6396626 - 6397072

Intron Length:

447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGGAGC

5'SS Class:

major

3'SS Sequence:

TTGTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAA

U12 Branch Point Sequence:

GTGGAAGTAAAA

Flanking Amino Acid:

PALCSNVLQHQWTEECMWPQ

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

61.9

42.9

Major BPS

58.6

0.22

1.1

59.7

34.6

Major PPT

85.8

0.81

0.8

81.2

30.8

Minor 5ss

34.8

-1.7

3.2

48.7

41.5

Minor BPS

37.5

-0.9

2.3

47.53

41.9

Associated Gene:

Gene:

TMEM39B

Ensembl Gene ID:

ENSAPLG00000006828

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007098

6391913 - 6397790

5878