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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6413034_6413647_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6413034 - 6413647

Intron Length:

614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTACC

5'SS Class:

strong_major

3'SS Sequence:

GCTGCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTAAC

U12 Branch Point Sequence:

GTGTGCCTAACG

Flanking Amino Acid:

ATEPSKANGQENGHLRLNGD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

74.9

35.3

Major BPS

54.3

0.11

1.2

57.5

37.5

Major PPT

68.9

0.43

0.9

61.7

34.9

Minor 5ss

30.2

-2.3

2.9

36.9

40.4

Minor BPS

49.5

-0.1

2.2

60.87

46.5

Associated Gene:

Gene:

MARCKSL1

Ensembl Gene ID:

ENSAPLG00000025946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017660

6412938 - 6414269

1332