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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6417355_6418674_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6417355 - 6418674

Intron Length:

1320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTAGCTTC

5'SS Class:

major

3'SS Sequence:

TCTCCTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

GCAGTTTTGACT

Flanking Amino Acid:

DSPCQCIVIIGGFLCP*

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

74.3

37.2

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

84.9

0.79

0.7

83.7

24.4

Minor 5ss

44.8

-0.6

2.8

59.6

45.1

Minor BPS

0.18

1.4

63.2

41.6

Associated Gene:

Gene:

HDAC1

Ensembl Gene ID:

ENSAPLG00000014752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044203

6417335 - 6427521

10187