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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6419170_6419269_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6419170 - 6419269

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCATTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCTTTCTCATTT

Flanking Amino Acid:

EEEKEEEEKKEEKEEEKAKE

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.5

39.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

85.3

0.79

0.8

77.2

Minor 5ss

40.2

-1.1

3.4

55.2

Minor BPS

56.1

0.27

1.8

75.31

42.2

Associated Gene:

Gene:

HDAC1

Ensembl Gene ID:

ENSAPLG00000014752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015434

6418675 - 6427521

8847