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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6421438_6421740_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6421438 - 6421740

Intron Length:

303

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACAAT

U12 Branch Point Sequence:

GAAAGTGTAACA

Flanking Amino Acid:

DESYEAIFKPVISKVMETFQ

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

Major BPS

57.4

0.18

1.3

65.4

Major PPT

0.63

0.9

77.4

36.9

Minor 5ss

28.1

-2.5

3.1

35.3

41.4

Minor BPS

42.1

-0.6

2.2

50.76

40.4

Associated Gene:

Gene:

HDAC1

Ensembl Gene ID:

ENSAPLG00000014752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044203

6417335 - 6427521

10187

ENSAPLT00000037567

6417885 - 6427521

9637

ENSAPLT00000015434

6418675 - 6427521

8847