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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6422579_6423171_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6422579 - 6423171

Intron Length:

593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTGGA

5'SS Class:

major

3'SS Sequence:

TTTCTGATCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CCTTTCTGATCC

Flanking Amino Acid:

DIVLAILELLKYHQRVLYID

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

66.1

40.1

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

73.9

0.54

0.9

66.5

39.4

Minor 5ss

32.4

-2

3.4

39.3

44.5

Minor BPS

51.7

0.03

1.8

62.26

43.5

Associated Gene:

Gene:

HDAC1

Ensembl Gene ID:

ENSAPLG00000014752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037567

6417885 - 6427521

9637

ENSAPLT00000015434

6418675 - 6427521

8847

ENSAPLT00000044203

6417335 - 6427521

10187