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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6424504_6426917_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6424504 - 6426917

Intron Length:

2414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGCTGC

5'SS Class:

major

3'SS Sequence:

TATTCTTTTCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

TTTGTCTTACTC

Flanking Amino Acid:

MSEYSKQMQRFNVGEDCPVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

66.1

40.7

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

77.1

0.61

75.7

38.1

Minor 5ss

46.6

-0.3

2.8

63.5

41.4

Minor BPS

61.7

0.35

1.7

73.1

38.8

Associated Gene:

Gene:

HDAC1

Ensembl Gene ID:

ENSAPLG00000014752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037567

6417885 - 6427521

9637

ENSAPLT00000015434

6418675 - 6427521

8847

ENSAPLT00000044203

6417335 - 6427521

10187