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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6427036_6427446_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6427036 - 6427446

Intron Length:

411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGAGTGAG

5'SS Class:

major

3'SS Sequence:

TTTGTCCTCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

TGTTTCCAAACA

Flanking Amino Acid:

YGLYRKMEIYRPHKANAEEM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

70.4

35.5

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

82.5

0.73

0.8

77.3

31.4

Minor 5ss

-2.4

3.2

35.6

41.4

Minor BPS

54.8

0.15

72.44

39.4

Associated Gene:

Gene:

HDAC1

Ensembl Gene ID:

ENSAPLG00000014752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044203

6417335 - 6427521

10187

ENSAPLT00000037567

6417885 - 6427521

9637

ENSAPLT00000015434

6418675 - 6427521

8847