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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6437050_6437179_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
6437050 - 6437179

Intron Length:
130

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTGAGAGCC

5'SS Class:
major

3'SS Sequence:
GCCTTCGTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTGAGAC

U12 Branch Point Sequence:
GAGGCTGAGACC

Flanking Amino Acid:
IYIITEYMEKGSLVDFLKTS

Intron Amino Acid Position:
320

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.2
0.62
1
63
36

Major BPS
46.7
-0.2
1.2
41.8
39.2

Major PPT
75
0.56
0.9
68.3
37.4

Minor 5ss
25.8
-2.8
3.1
25.9
36.5

Minor BPS
38
-0.9
2.2
42.1
39.4

Associated Gene:

Gene:
LCK

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6434659 - 6439641
4983