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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6446356_6446917_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6446356 - 6446917

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTGCCTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CGGCCCTGACCC

Flanking Amino Acid:

LIRNVDAVEKRLAGSSGTIT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

74.8

38.1

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

73.2

0.52

0.8

36.3

Minor 5ss

-1.5

3.2

48.2

47.9

Minor BPS

47.1

-0.2

1.8

53.46

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014413

6446159 - 6449458

3300