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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6448002_6448130_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6448002 - 6448130

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGGAGC

5'SS Class:

major

3'SS Sequence:

CCCTCCCGCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

AGCCCCTCACCC

Flanking Amino Acid:

QWKRLHRPLERGRPLQESFI

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

64.2

41.9

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

65.4

0.35

0.9

56.8

33.4

Minor 5ss

27.6

-2.6

34.8

41.4

Minor BPS

47.4

-0.2

1.8

55.51

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022183

6446159 - 6449458

3300

ENSAPLT00000014413

6446159 - 6449458

3300

ENSAPLT00000042923

6446090 - 6449458

3369