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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6448545_6448625_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6448545 - 6448625

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGTG

5'SS Class:

strong_major

3'SS Sequence:

TGGGGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TGTTATTTACCC

Flanking Amino Acid:

QGLLEREWIEAGHPFHLRCA

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.8

35.2

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

62.4

0.28

54.5

41.4

Minor 5ss

28.6

-2.5

3.4

37.5

47.2

Minor BPS

0.26

1.8

71.93

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042923

6446090 - 6449458

3369

ENSAPLT00000014413

6446159 - 6449458

3300