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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6451281_6451379_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
6451281 - 6451379

Intron Length:
99

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTTGGTGCT

5'SS Class:
major

3'SS Sequence:
TTCCTTCTCCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCCTGAC

U12 Branch Point Sequence:
GTGTCCCGAACC

Flanking Amino Acid:
TSTRIGKFEARFFHLAFEEE

Intron Amino Acid Position:
272

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.3
0.57
1.2
70.9
39.4

Major BPS
68.9
0.47
1
59.2
39.1

Major PPT
83.4
0.75
0.7
76.4
32.2

Minor 5ss
30.3
-2.3
3.3
42
44.7

Minor BPS
56.7
0.19
1.9
69.32
41.5

Associated Gene:

Gene:
EIF3I

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6450777 - 6458343
7567