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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6452272_6452540_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
6452272 - 6452540

Intron Length:
269

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTCGGTGCC

5'SS Class:
major

3'SS Sequence:
TTTGACCCTCCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAC

U12 Branch Point Sequence:
CCTTTTTTGACC

Flanking Amino Acid:
SGELNQFSAKSGEQLSNIKE

Intron Amino Acid Position:
181

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.2
0.48
1.3
70.3
35.3

Major BPS
86.5
0.91
0.8
77.4
37.4

Major PPT
77
0.61
0.9
67
40.2

Minor 5ss
28
-2.5
3.2
36
40.9

Minor BPS
65.9
0.48
1.2
68.18
38.4

Associated Gene:

Gene:
EIF3I

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6450777 - 6458343
7567