Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_6452920_6453215_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6452920 - 6453215

Intron Length:

296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGCTC

5'SS Class:

major

3'SS Sequence:

GCTCTGTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTGAC

U12 Branch Point Sequence:

GCCCCAGTGAGT

Flanking Amino Acid:

NSCRLWDCETGKQLALVKTS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

43.2

Major BPS

48.3

-0.1

1.3

40.8

41.4

Major PPT

70.7

0.47

64.5

41.4

Minor 5ss

34.2

-1.8

3.6

50.1

46.4

Minor BPS

37.8

-0.8

2.3

50.16

43.7

Associated Gene:

Gene:

EIF3I

Ensembl Gene ID:

ENSAPLG00000013429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014037

6450777 - 6458343

7567