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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6455161_6455559_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6455161 - 6455559

Intron Length:

399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTTCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

TGTGCTGTGACT

Flanking Amino Acid:

EIRFLGLNYKYMVPFLLNQC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.1

39.1

Major BPS

0.22

1.2

52.4

43.3

Major PPT

79.5

0.66

0.8

73.2

31.7

Minor 5ss

27.9

-2.5

3.2

39.3

46.1

Minor BPS

51.4

0.13

2.1

75.31

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013975

6454993 - 6456376

1384