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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6468170_6468313_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6468170 - 6468313

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAA

U12 Branch Point Sequence:

AGTCTGAAAACT

Flanking Amino Acid:

NKALLEMAEEKTLRDKELEG

Intron Amino Acid Position:

434

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

64.4

0.36

1.2

57.3

41.7

Major PPT

85.2

0.79

0.8

79.9

32.1

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

40.5

-0.6

2.3

61.16

42.3

Associated Gene:

Gene:

TXLNA

Ensembl Gene ID:

ENSAPLG00000013293

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013853

6466819 - 6473605

6787