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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6492958_6493051_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6492958 - 6493051

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAT

U12 Branch Point Sequence:

CTGCCCTCACCC

Flanking Amino Acid:

EPVGAEQPAGRQLRRCPGSH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

62.2

0.3

1.4

72.5

43.5

Major PPT

78.6

0.64

0.7

72.6

25.7

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

48.9

-0.1

1.9

59.89

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028507

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042696

6492855 - 6495456

2602