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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6497621_6498191_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6497621 - 6498191

Intron Length:

571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAGAA

U12 Branch Point Sequence:

AGTTACAGAAAC

Flanking Amino Acid:

VLSKVEASGELEDEEWEDWE

Intron Amino Acid Position:

443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

57.1

0.18

52.9

34.1

Major PPT

88.6

0.87

0.7

83.9

31.1

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

45.3

-0.3

1.9

58.78

38.6

Associated Gene:

Gene:

BSDC1

Ensembl Gene ID:

ENSAPLG00000012066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012573

6497588 - 6502433

4846