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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6499567_6499765_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6499567 - 6499765

Intron Length:

199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTGG

5'SS Class:

strong_major

3'SS Sequence:

GAGCTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TGATGCTGAGCT

Flanking Amino Acid:

YFYKLHRLEQDEARREALKQ

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

69.7

43.7

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

67.2

0.39

58.9

37.9

Minor 5ss

38.2

-1.3

3.1

49.2

47.1

Minor BPS

48.6

-0

2.1

45.1

Associated Gene:

Gene:

BSDC1

Ensembl Gene ID:

ENSAPLG00000012066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012573

6497588 - 6502433

4846