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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6499835_6499992_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6499835 - 6499992

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGAGC

5'SS Class:

major

3'SS Sequence:

GTGTTGCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCTCCCTCACGC

Flanking Amino Acid:

PSIRALYTKMVPVAVSHSEF

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

65.6

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

71.2

0.48

61.8

44.4

Minor 5ss

27.3

-2.6

30.8

36.9

Minor BPS

43.6

-0.5

2.1

51.58

45.7

Associated Gene:

Gene:

BSDC1

Ensembl Gene ID:

ENSAPLG00000012066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012573

6497588 - 6502433

4846