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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6500109_6500732_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6500109 - 6500732

Intron Length:

624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGGGCT

5'SS Class:

major

3'SS Sequence:

TTGTCCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATTAC

U12 Branch Point Sequence:

ATTACCTCAATG

Flanking Amino Acid:

DPATYCNEPDGPAELLEAWL

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

64.9

Major BPS

58.2

0.21

49.8

34.7

Major PPT

85.2

0.79

0.8

77.2

Minor 5ss

38.1

-1.3

3.6

52.9

46.3

Minor BPS

62.4

0.25

1.7

67.22

40.4

Associated Gene:

Gene:

BSDC1

Ensembl Gene ID:

ENSAPLG00000012066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012573

6497588 - 6502433

4846