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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6503715_6506253_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6503715 - 6506253

Intron Length:

2539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTCAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

TCTTTTTCAAAA

Flanking Amino Acid:

IHSDWYGEDAGDVLVVPIKL

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

71.2

34.5

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

72.4

0.5

75.7

31.8

Minor 5ss

24.3

-3

3.1

29.7

43.1

Minor BPS

57.2

0.22

1.6

68.07

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012501

6502769 - 6507059

4291