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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6529874_6530901_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6529874 - 6530901

Intron Length:

1028

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAATACCG

5'SS Class:

major

3'SS Sequence:

AGAAAGACTGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

TTAAGCTTAAAA

Flanking Amino Acid:

NDYGYNHESECLTCSLCFSV

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

1.1

55.6

41.7

Major BPS

79.5

0.73

0.9

36.9

Major PPT

51.9

0.04

1.1

41.1

42.8

Minor 5ss

34.1

-1.8

3.1

41.4

38.6

Minor BPS

57.6

0.23

1.9

70.66

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022542

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048028

6529052 - 6533036

3985