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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6536631_6536817_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
6536631 - 6536817

Intron Length:
187

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGACTT

5'SS Class:
strong_major

3'SS Sequence:
TTCAATCATGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CAATCAT

U12 Branch Point Sequence:
TCTGCTTCAATC

Flanking Amino Acid:
PLDTVEVEAEGHDMLSLLFH

Intron Amino Acid Position:
79

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
92.3
1
0.8
84.6
33.3

Major BPS
68.1
0.45
1.1
69.7
35.6

Major PPT
72.5
0.51
1
66.3
39.4

Minor 5ss
37.9
-1.4
3.3
56.5
47.6

Minor BPS
57.2
0.21
1.6
65.76
40.9

Associated Gene:

Gene:
ZBTB8OS

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6535370 - 6539035
3666